No description, website, or topics provided.
Shell Perl R Other
Switch branches/tags
Nothing to show
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Permalink
Failed to load latest commit information.
aln_bis_20141120 Update Jan 23, 2018
aln_bis_20141218 Update Jan 23, 2018
aln_bis_20150310 Update Jan 23, 2018
aln_bis_20150310_XZ69-XZ81 Update Jan 23, 2018
aln_bis_20150310_bak Update Jan 23, 2018
aln_bis_20150505 Update Jan 23, 2018
aln_bis_20150505_XZ13-XZ15 Update Jan 23, 2018
aln_bis_20160328 Update Jan 23, 2018
aln_bis_gr_2014 Update Jan 23, 2018
aln_bis_stat Update Jan 23, 2018
aln_bwa_20141120 Update Jan 23, 2018
aln_bwa_20150107 Update Jan 23, 2018
aln_bwa_20150505 Update Jan 23, 2018
aln_bwa_XZ69 Update Jan 23, 2018
aln_bwa_gr_2014 Update Jan 23, 2018
aln_bwa_gr_2014_samtools Update Jan 23, 2018
aln_bwa_mer Update Jan 23, 2018
aln_bwa_mer_0g Update Jan 23, 2018
bed_file_ana_sites_4CK Update Jan 23, 2018
bed_file_ana_sites_CK Update Jan 23, 2018
bed_file_ana_sites_OTOB Update Jan 23, 2018
bed_file_forIGV Update Jan 23, 2018
bed_file_for_methpipe Update Jan 23, 2018
bed_file_for_methpipe_GR Update Jan 23, 2018
bed_file_merge_OTOB Update Jan 23, 2018
bed_file_tem Update Jan 23, 2018
bs-seq_DMR_identify_ctrl Update Jan 23, 2018
bs-seq_DMR_methpipe Update Jan 23, 2018
bs-seq_DMR_methpipe_GR Update Jan 23, 2018
bs-seq_DMR_methpipe_bak Update Jan 23, 2018
bs-seq_DMR_methpipe_test Update Jan 23, 2018
bs-seq_DMS_identify Update Jan 23, 2018
bs-seq_DMS_identify_7g Update Jan 23, 2018
bs-seq_DMS_identify_ctrl Update Jan 23, 2018
bs-seq_DMS_identify_gr Update Jan 23, 2018
bs-seq_DMS_identify_heatmap Update Jan 23, 2018
bs-seq_DMS_identify_heatmap_CK Update Jan 23, 2018
bs-seq_winDMR Update Jan 23, 2018
call_var_VarScan2 Update Jan 23, 2018
call_var_VarScan2_5sam Update Jan 23, 2018
call_var_VarScan2_bak Update Jan 23, 2018
call_var_gatk_BR Update Jan 23, 2018
call_var_retroseq Update Jan 23, 2018
call_var_samtools Update Jan 23, 2018
determine_the_right_ancestor Update Jan 23, 2018
doc Update Jan 23, 2018
gr_2014_aln_bwa_varscan2 Update Jan 23, 2018
gr_2014_call_var_retroseq Update Jan 23, 2018
problem_XZ Update Jan 23, 2018
raw_data Update Jan 23, 2018
raw_data_bs-seq Update Jan 23, 2018
stat_chro_mito_num Update Jan 23, 2018
test Update Jan 23, 2018
README.md Add README.md Feb 11, 2018
gener_cmd_stat_func_class.pl init Aug 16, 2017

README.md

DMS number and epimutation rate

R --vanilla --slave < stat_DMS_rate_4geno.R
R --vanilla --slave < run_step3_merge_anno.R
R --vanilla --slave < gener_mer_figure_epi_num_rate.R
./bs-seq_DMS_identify_ctrl/stat_DMS_num/fig_dms_num_rate_4geno.pdf